logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Gene Cluster: MGYG000001391_3|CGC4

You are here: cgc->  ?help

CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000001391_01621
Chondroitin sulfate ABC endolyase
CAZyme 139073 142264 - PL8| PL8_2
MGYG000001391_01622
hypothetical protein
null 142353 143234 - No domain
MGYG000001391_01623
Chondroitin sulfate ABC endolyase
CAZyme 143267 146179 - PL8| PL8_2
MGYG000001391_01624
hypothetical protein
null 146374 147387 - DUF5017
MGYG000001391_01625
hypothetical protein
TC 147407 149155 - 8.A.46.1.3
MGYG000001391_01626
TonB-dependent receptor SusC
TC 149178 152255 - 1.B.14.6.1
MGYG000001391_01627
Unsaturated chondroitin disaccharide hydrolase
CAZyme 152720 153610 + GH88
MGYG000001391_01628
hypothetical protein
null 153595 153927 + No domain
MGYG000001391_01629
Chondroitin sulfate ABC exolyase
CAZyme 154152 157199 + PL8| PL8_2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is host glycan

Protein ID eCAMI subfam CAZyme substrate
MGYG000001391_01621 PL8_e27
MGYG000001391_01623 PL8_e27
MGYG000001391_01627 GH88_e23|3.2.1.- hostglycan
MGYG000001391_01629 PL8_e16|4.2.2.20 hostglycan

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig


Genomic location